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fix: parse-safe D/C match in pivoted_invasive_lines #2139

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fix: parse-safe D/C match in pivoted_invasive_lines #2139

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3 changes: 2 additions & 1 deletion mimic-iii/concepts/pivot/pivoted_invasive_lines.sql
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Original file line number Diff line number Diff line change
Expand Up @@ -19,8 +19,9 @@ WITH stg0 AS
, CASE WHEN itemid < 8000 THEN value ELSE NULL END AS line_type
, CASE WHEN itemid > 8000 THEN value ELSE NULL END AS line_site
-- the stopped column is always present for invasive lines
-- LIKE avoids apostrophe escaping that breaks sqlglot transpile
, CASE
WHEN ce.stopped = 'D/C\'d' THEN 1
WHEN ce.stopped LIKE 'D/C%' THEN 1
WHEN ce.stopped = 'NotStopd' THEN 0
ELSE NULL END AS line_dc
FROM `physionet-data.mimiciii_clinical.chartevents` ce
Expand Down
8 changes: 4 additions & 4 deletions mimic-iii/concepts_duckdb/pivot/pivoted_invasive_lines.sql
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Original file line number Diff line number Diff line change
Expand Up @@ -28,13 +28,13 @@ WITH stg0 AS (
CASE WHEN itemid < 8000 THEN value ELSE NULL END AS line_type,
CASE WHEN itemid > 8000 THEN value ELSE NULL END AS line_site,
CASE
WHEN ce.stopped = 'D/C''d'
WHEN ce.stopped LIKE 'D/C%'
THEN 1
WHEN ce.stopped = 'NotStopd'
THEN 0
ELSE NULL
END AS line_dc
FROM mimiciii.chartevents AS ce
FROM mimiciii_clinical.chartevents AS ce
WHERE
ce.itemid IN (
229,
Expand Down Expand Up @@ -138,8 +138,8 @@ WITH stg0 AS (
mv.location AS line_site,
starttime,
endtime
FROM mimiciii.procedureevents_mv AS mv
INNER JOIN mimiciii.d_items AS di
FROM mimiciii_clinical.procedureevents_mv AS mv
INNER JOIN mimiciii_clinical.d_items AS di
ON mv.itemid = di.itemid
WHERE
mv.itemid IN (
Expand Down
10 changes: 5 additions & 5 deletions mimic-iii/concepts_postgres/pivot/pivoted_invasive_lines.sql
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Original file line number Diff line number Diff line change
Expand Up @@ -26,15 +26,15 @@ WITH stg0 AS (
ELSE NULL
END AS line_number,
CASE WHEN itemid < 8000 THEN value ELSE NULL END AS line_type,
CASE WHEN itemid > 8000 THEN value ELSE NULL END AS line_site, /* the stopped column is always present for invasive lines */
CASE WHEN itemid > 8000 THEN value ELSE NULL END AS line_site, /* the stopped column is always present for invasive lines */ /* LIKE avoids apostrophe escaping that breaks sqlglot transpile */
CASE
WHEN ce.stopped = 'D/C''d'
WHEN ce.stopped LIKE 'D/C%'
THEN 1
WHEN ce.stopped = 'NotStopd'
THEN 0
ELSE NULL
END AS line_dc
FROM mimiciii.chartevents AS ce
FROM mimiciii_clinical.chartevents AS ce
WHERE
ce.itemid IN (
229, /* INV Line#1 [Type] */
Expand Down Expand Up @@ -135,8 +135,8 @@ WITH stg0 AS (
mv.location AS line_site,
starttime,
endtime
FROM mimiciii.procedureevents_mv AS mv
INNER JOIN mimiciii.d_items AS di
FROM mimiciii_clinical.procedureevents_mv AS mv
INNER JOIN mimiciii_clinical.d_items AS di
ON mv.itemid = di.itemid
WHERE
mv.itemid IN (
Expand Down
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